\documentclass[12pt,notitlepage,oneside]{report}
\setcounter{secnumdepth}{3}
\usepackage{ju_cse_msc_thesis}
\usepackage{lipsum}
\usepackage{algorithm}
\usepackage{algorithmic}
\renewcommand{\algorithmicrequire}{\textbf{Input:}}
\renewcommand{\algorithmicensure}{\textbf{Output:}}
%\usepackage[acronym, toc]{glossaries}
% Uncomment any of the following lines should you need to
% suppress the LOF, or LOT or LOA
% \suppresslistoffigures
% \suppresslistoftables
% \suppresslistofalgorithms
% For index creation, comment this out if you do not want to create %an index
\makeindex[intoc]
%\patchcmd{\titlepage}{empty}{fancy}{}{}
%\patchcmd{\chapter}{plain}{fancy}{}{}
\begin{document}
% Edit as needed below this line
% %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% Chapter-1
\input{chapters/introduction.tex}
% Chapter-2
\input{chapters/literature_review.tex}
% Chapter-3
\input{chapters/background.tex}
% Chapter-4
\input{chapters/methodology.tex}
% Chapter-5
\input{chapters/result_discussion.tex}
% Chapter-6
\input{chapters/conclusion.tex}
% Chapter showing example of index creation
%\input{indexcreation.tex}
% Bibliographies and appendices
\input{pages/bibliography.tex}
% Index, comment this out if you do not want to create an index
\printindex
\appendix
% Algorithms
%\input{chapters/algorithms.tex}
\end{document}